Results for "Sequencing Data Analysis"
Blogs
List of comparative genomics resources !
...enomes A data management and analysis system for metagenomes...MBGD -- Microbial genome database for comparative analysis Con...phylogenetic and evolutionary analysis. PhyloPat -- the phyloge...hensive suite of programs and databases for comparative analysis of...729 days ago
Understanding DUMP files from NCBI Taxonomy database !
*.dmp files are bcp-like dump from GenBank taxonomy database General information. Fi...- node id in GenBank taxonomy database parent tax_id --...t node id in GenBank taxonomy database rank -- rank of t...this subtree has no sequence data yet comments -- free-...712 days ago
Tools for Differential expression analysis
apeglm - https://bioconductor.org/packages/release/bioc/html/apeglm.html ashr - https://github.com/stephens999/ashr, https://cran.r-project.org...596 days ago
Interesting Bioinformatics Resources !
...e research 2. Parallel sequencing lives, or what makes large sequencing projects successful http...9921002300 4. A Reproducible Data Analysis Workflow with R Markdown, Git...is automated using continuous analysis https://www.nature.com/a...593 days ago
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore Simple Sequence...esearch questions, you may find that other tools are more appropriate for your analysis.477 days ago
Chromosome breakpoint - a breakup to remember
Chromosome breakpoint refers to the physical location where a chromosom...ing a variety of techniques, including cytogenetic anal...olymerase chain reaction (PCR) and next-generation sequencing (NGS). These techniques can...477 days ago
Common steps for reads mapping !
Mapping reads to a r...step in many types of genomic analysis, such as variant calling and gene expression analysis. Here are some general st...tools. Prepare the read data: The reads should be in a format...-processing: Depending on the analysis being performed, post-process...475 days ago
Steps to find palindrome in genomes !
Palindromes are sequences of nucleotides that read the same bac...plex palindromic structures. Dot plot analysis: Dot plot anal...ns can be identified. Next-generation sequencing: High-throughput sequencing technologies, such as PacBi...475 days ago
Calculate the significance of the difference between two trends
To calculate the signi...test such as a t-test or ANOVA (analysis of variance). Here are th...ficant difference. Collect data on the two trends. Make sure that the data is independent, normally distribu...software you use to perform the analysis. The most common methods for...470 days ago
Free Books on Machine Learning and Artificial Intelligent !
An Introduction to Statistical LearningThis b...wishes to use contemporary tools for data analysis. https://hastie.su.domains/ISLR2/ISLRv2_website.pdf Python Data Science HandbookYou’ll...ning, manipulating, and transforming data — or building machine learn...468 days ago
