Results for "Statistical Data Analysis"
Blogs
List of comparative genomics resources !
...enomes A data management and analysis system for metagenomes...MBGD -- Microbial genome database for comparative analysis Con...phylogenetic and evolutionary analysis. PhyloPat -- the phyloge...hensive suite of programs and databases for comparative analysis of...705 days ago
Understanding DUMP files from NCBI Taxonomy database !
*.dmp files are bcp-like dump from GenBank taxonomy database General information. Fi...- node id in GenBank taxonomy database parent tax_id --...t node id in GenBank taxonomy database rank -- rank of t...this subtree has no sequence data yet comments -- free-...688 days ago
Tools for Differential expression analysis
apeglm - https://bioconductor.org/packages/release/bioc/html/apeglm.html ashr - https://github.com/stephens999/ashr, https://cran.r-project.org...572 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.yo...sense approaches to sharing tabular data alongside publication ht...2666389921002300 4. A Reproducible Data Analysis Workflow with R Markdown, Git...flows is automated using continuous analysis https://www.nature.com/a...569 days ago
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore Simple Sequence...esearch questions, you may find that other tools are more appropriate for your analysis.453 days ago
Chromosome breakpoint - a breakup to remember
Chromosome breakpoint refers to the physical location where a c...eakpoints can be detected using a variety of techniques, including cytogenetic analysis, fluorescence in situ hybridi...453 days ago
Common methods to discover tandem repeats
Tandem repeats are DNA sequences that are repeated in a co...d protein sequences. The tool uses a statistical algorithm to identify...by comparing the input sequence to a database of known repeats and then...ndem repeats that match those in the database...451 days ago
Common steps for reads mapping !
Mapping reads to a re...step in many types of genomic analysis, such as variant calling and gene expression analysis. Here are some general st...tools. Prepare the read data: The reads should be in a format...-processing: Depending on the analysis being performed, post-process...451 days ago
Steps to find palindrome in genomes !
Palindromes are sequences of nucleotides that read the sam...indromes, but may miss more complex palindromic structures. Dot plot analysis: Dot plot analysis is a graphical method that ca...451 days ago
Calculate the significance of the difference between two trends
...tween two trends, you can use a statistical test such as a t-test or ANOVA (analysis of variance). Here are th...ficant difference. Collect data on the two trends. Make sure that the data is independent, normally distribu...software you use to perform the analysis. The most common methods for...446 days ago
