Useful link to teach evolution !
...tps://cbs.umn.edu/populus/overview Drift & Gene Flow https://cartwrig.ht/apps/genie/ (Cock van Oos...ut has a great ppt to lead students through this) See also https://cartwrig.ht/apps/redlynx/ https://dem...634 days ago
Must read paper and books in evolution biology !
...rphisms. 409: 928-33. 2. Wright S., Dobzhansky T., Hovanitz...94. 2. Maynard Smith and Haigh. 1974. The hitch-hiking effe..., 2018 The Neutral Theory in Light of Natural Selection. Mole...43:362-381. 2. Corbett-Detig et al. 2013. Genetic incompat...634 days ago
Tools for Sequence translation !
BOrf - https://github.com/betsig/borf CodAn - https://github.com/pedronachtigall/CodAn EMBOSS-Sixpack - https://www....PLASS - https://github.com/soedinglab/plass Prodigal - https://github....601 days ago
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Interesting Bioinformatics Resources !
...makes large sequencing projects successful https://academic.oup.com/gigascience/article/6/11/gix100/4...A. Baggerly from MD Anderson [The Importance of Reproducible Research in High-Throughput Biology](https://...598 days ago
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Bioinformatics tools to explore SSRs in genomes !
...from various organisms and can identify perfect, compound, and imperfect SSRs. Primer3: Primer3 is a web-based tool that designs PCR primers for SSRs. It can design primers for perfect and impe...481 days ago
Common methods to discover tandem repeats
...ats are DNA sequences that are repeated in a contiguous manner in the genome. The...andem repeats in genomic DNA. PCR primers are designed to flank the tandem repeat...ple. It can be used to detect tandem repeats by digesting genomic DNA with a rest...480 days ago
Steps to find palindrome in genomes !
...ndIII, recognize palindromic sequences and cleave DNA at these sites. By digesting the genome with these e...palindromic regions can be identified. Next-generation sequencing: High-throughput sequencing techno...480 days ago
Calculate the significance of the difference between two trends
...To calculate the significance of the difference be...e hypothesis (H1). For example, H0 might be that there is no signifi...e between the two trends, while H1 might be that there is a signific...Compare the p-value to your chosen significance level (usually 0.05...475 days ago