Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to anal...teresting; and the great biological programmer also read about the BioPerl packages, g...ng with scientific words. Thanks to all of you for reading.4089 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge am...they’re free to download the source code and read exactly what the program does...e functionality that you need in your analysis is already code...3846 days ago
Comparison of Short Read De Novo Alignment Algorithms
Excellent article to introduce different sequencing methods along with tools for de novo assembly of sequencing reads and their relevant references. Title: Comparison of Short Read De Novo Alignment Algorithms Author: Nikhil Gopal4048 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NGS workshop tut...bioinformatics/btr441 ngs_backbone: a pipeline for read cleaning, mapping and SNP cal...p://www.biomedcentral.com/1471-2105/14/S7/S11 DDBJ read annot...3626 days ago
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Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows...ime has been change, the biological programmers are ready to use the C++ libraries of...switch between upper/lower case, etc.Applications: read optio...4086 days ago
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Best book Titles for Learning Bionformatics
Nothing can add to our intellect more than reading a book. In books, we can e...ves and other people’s lives. Reading can make us more intelligent, updated, imaginative. Without reading we wouldn’t know any...Human Molecular Genetics, Andrew P. Read, Tom...4056 days ago
High Density Sheep SNP Genotyping Chip released!!!
If you are working on Sheep genomics then there is a good news for you. FarmIQ in conjunction with Illumina and t...from 23 breeds. The remaining SNPs were derived from the draft ovine genome. Read more...4035 days ago
Illumina reveals first dataset of long reads
With the help of Moleculo technology , acquired by Illumina releases new service for long reads sequencing i.e., FastTrack Long Reads. Average read length is around 8,500 base pai...also check following pages for publications on long reads and...4046 days ago
Project Assistant Position at JMI
Project Assistant Position (@ Rs.10,000/pm Fixed) is available for one year ina research project funded by the De...e paid. For any further information you may e-mail to: mihassan@jmLac.in Read more...3662 days ago
Bioinformatician for a lab at the Weizmann Institute of Science, Israel
We are looking for enthusiastic, motivated and talented people, at all career stages (MSc, PhD, postdoctoral fell...biology and bioinformatics to study the biology of PTMs in health and disease. Read more...3631 days ago
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Perl Poem: Parse it in both Perl and English!
Larry's, er, corpus has fortunately been overshadowed by that of the reigning Perl Poet, Sharon Hopkins. She has...together), tell me. do something if distressed; @dawn, dance;@evening, sing;read (book...4057 days ago
You can't install David Brownlee ;-)
By mistake I ask cpan to install abs, and it return this message. jitendra@jitendra-Aspire-S3-391[parallelLastz] sudo cpan install abs [ 4:43AM]Going to read '/hom...1969 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a r...genome. But the amount of information involved is huge, so recently, it's been read using...4055 days ago
The Story of You: ENCODE and the human genome
Ever since a monk called Mendel started breeding pea plants we've been learning about our genomes. In 1953, Watso...ENCODE project, as it's called, is the latest chapter in the story of you. To read the E...4045 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has...dna = Entrez.efetch(db='nucleotide',id=nm, rettype = 'fasta', retmode= 'text').read().spl...1274 days ago
R script to visualize fastANI core-genome comparison
####### # Purpose: Visualize fastANI core-genome comparison # Usage: Rscript # Output: .pdf # Uses genoP...s(TRUE)[2] fastANI_visual_file=commandArgs(TRUE)[3] library(genoPlotR) #Read fastA...1240 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineerin...PMID IDs; PMID: 27378293 and PMID: 26384938 can be read. What's your all-time fa...increasing amount of data in databases, there is already a ma...2500 days ago
Single molecule Sequencing (SMS)
SMS is now slowly gaining place in sequencing world, more and more scientists now keen to...ively less complex protocal and less time. One of most successful so far is SMRT from Pacbio and...3365 days ago
Comment on "Short-read assembly using Spades !"
...) is a popular tool for short-read assembly. It can assemble reads generated from Illumina, IonTorrent, PacBio, and Oxford Nanopore sequen...f how to use SPAdes for short-read assembly: Install SPAdes...-mer length or enabling error correction. The SPAdes manual provides d...559 days ago