Results for "Substring"
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Pattern Matching Problem Solution with Perl
...all occurrences of a pattern in a string.#Given: Strings Pattern and Genome.#Return: All starting positions in Genome where Pattern appears as a substring. Use 0-based indexing.use str...3288 days ago
Bio-Scripts
Implementation of biological random mutation with Perl
#!/usr/bin/perl -w use strict; use warnings; #sequence for a better recognition my $DNA="AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA \ n";...2936 days ago
Genetic Algorithms demonstration with word DNA in Perl
...# do nothing if the entry is not matched in the DNA, or vice versa next unless $words =~ /$entry/; # we have a match! (it may be a substring, that's OK) # increment t...2407 days ago
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Comments
Comment on "Sibelia: A comparative genomics tool"
...tations. Each stage has two parameters, K and D. Let's call K-mer a substring of length K. At each stage "...hared between the genomes. If input genomes doesn't have such shared substrings, then "Sibelia" won't be abl...1320 days ago
