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RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
...works by offering a standard software pipeline for identifying genomic features (i.e., protein-encoding genes...Ttk offers a choice of software for identifying and annotating genomic features as well as the ability to add...2982 days ago
YASS :: genomic similarity search tool
...other simple, but interesting feature is that you can specify the seed pattern used in the search step (as provided for example by iedera). Main features of YASS are: multiple, pos...2977 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
...takes two genomes, computes alignments, and then keeps only the parts that are orthologous, i.e. following the conserved order and orientation of features, such as protein coding genes...2966 days ago
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