Resolving the complexity of the human genome using single-molecule sequencing
The human genome is arguably the most complete mammalian reference assembly yet more than 160 euchromatic gaps remai...ngle-molecule-sequencing-close-gaps-chart-complexity-human-reference suggest a great...3264 days ago
CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality g...rcular genome viewer written by Paul Stothard. The goal of GView is to provide great...2829 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool Both are contained...ation approaches designed to exploit the high mappability of long reads (i.e., great...2668 days ago
2660 days ago
Oxford Nanopore Sequencing, Hybrid Error Correction, and de novo Assembly of a Eukaryotic Genome
Monitoring the progress of DNA molecules through a membrane pore has been postulated as...rate: the contig N50 length is more than ten-times greater than an Illumina-only assembly (678kb versus 59.9kbp), and has great...2393 days ago
2043 days ago
Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a dee...inner identifies barcodes from the raw signal (a.k.a. squiggle) which gives it great...2030 days ago
Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolut...inner identifies barcodes from the raw signal (a.k.a. squiggle) which gives it great...1590 days ago