Java and BioJava Tutorial links
BioJava provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of this bookmark is to provide useful links for bioinformatician. Please add more useful Java and BioJava links here ...Tags: Java, BioJava
3960 days ago
Java utilities for Next Generation Sequencing by Pierre Lindenbaum
Java utilities for Bioinformatics https://github.com/lindenb/jvarkitTags: Bioinformatics, Computational Biology, Java, Utilities #Tools #Scripts #Pierre
3576 days ago
Tags: GView, Java, application, view, prokaryote, genomes, circular, linear, context
2544 days ago
DRAWID: user-friendly Java software for chromosome measurements and idiogram drawing
"DRAWID has number of advantages including a user-friendly interactive interface, possibility for simultaneous chromosome and FISH/GISH/banding signal measurement and idiogram drawing as well as number of useful functions facilitating the procedure of chromosome analysis," explain the scientists....Tags: DRAWID, user-friendly, Java, software, chromosome, measurements, idiogram, drawing
2407 days ago
Jvarkit : Java utilities for Bioinformatics
Collection of Java tool kits for bioinformatics works: Jvarkit : Java utilities for BioinformaticsTags: Bioinformatics, NGS, Java, toolkit, Genome, NGS, reads
2215 days ago
CGView.js is a Circular Genome Viewing tool
CGView.js is a Circular Genome Viewing tool for visualizing and interacting with small genomes. This software is an adaptation of the Java program CGView. CGView.js is the genome viewer of Proksee, an expert system for genome assembly, annotation and visualization. Featu...Tags: CGView.js, Circular, Genome, Viewing, tool, visualize, interact, software, adaptation, Java, program, CGView
95 days ago
Tags: sankeyNetwork, networkD3, Visualization, Plot, java
2277 days ago