Results for "lineage"
Bookmarks
...niversal single-copy orthologs selected from OrthoDB. BUSCO assessments are implemented in open-source software, with comprehensive lineage-specific sets of Benchmarking...2967 days ago
- ...asis. It works by selecting potential ortholog matches from a reference database of amino acid sequences, then using these matches to calculate a lineage probability index (LPI) score...
2924 days ago
Comparative genomics educational material and papers bookmarks
...ated. The number of porcine EBRs is comparable to the number of bovine-lineage-specific EBRs (100) reported...tly lower resolution (500 kilobases (kb)), indicating that both lineages evolved with an average rate...2784 days ago
- ...BI web site (displayed in a new window) Possibility to download the corresponding subtree in newick extended format Possibilty to get the whole lineage from the current node/tip to...
2632 days ago
CAR: Reconstructing Contiguous Regions of an Ancestral Genome
...data. The precision is further increased by mapping inversions as small as 31 bp. Analysis of the predicted evolutionary breakpoints in the human lineage confirms certain published ob...2594 days ago
- ...st estimates of genome completeness and contamination by using collocated sets of genes that are ubiquitous and single-copy within a phylogenetic lineage. Assessment of genome quality...
2224 days ago
Understanding pango networks !
...jority of instances it is expected that Pango lineage names and designations will c...t as guidelines for the decisions made by the Lineage Designation Committee. https...twork/how-does-the-system-work/what-are-pango-lineages/ Reference paper https://w...982 days ago
- ...th agencies worldwide to track the transmission and spread of SARS-CoV-2, including variants of concern. This website documents all current Pango lineages and their spread, as well as...
952 days ago
- All the rules to classify a Lineage ! https://www.pango.network/the-pango-nomenclature-system/statement-of-nomenclature-rules/
923 days ago
