3936 days ago
A Brief Bioinformatics Tutorial
...ill see how to look efficiently for a particular protein sequence, how to blast it against the database of your choice to find homologues, how to perform a multiple alignment of the h...3665 days ago
Swabs to Genomes: A Comprehensive Workflow
...ental sample (a swab) to a published microbial genome; empowering even a lab or classroom with limited resources and bioinformatics experience to perform it.3584 days ago
3262 days ago
1120 days ago
Ensembl comparative genomics resources
...ere is relevant to these projects. The consistency of the annotation across species and the focus on vertebrates makes Ensembl an ideal system to perform and support vertebrate compar...3017 days ago
Trimmomatic: A flexible read trimming tool for Illumina NGS data
...everse_paired.fq.gz output_reverse_unpaired.fq.gz ILLUMINACLIP:TruSeq3-PE.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 This will perform the following: Remove adap...2970 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
...ith an ideogramoutput architecture, where the patterns are represented with several HSV values (only value varies). The method can perform both in small- and large-scal...2959 days ago
2847 days ago
BLAST Ring Image Generator (BRIG)
...r/?group_id=328245. Features: Images show similarity between a central reference sequence and other sequences as concentric rings. BRIG will perform all BLAST comparisons and fil...2802 days ago