Results for "sample"
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Swabs to Genomes: A Comprehensive Workflow
...ctive of the present study was to design, test, troubleshoot, and publish a simple, comprehensive workflow from the collection of an environmental sample (a swab) to a published micro...3607 days ago
Simons Genome Diversity Project
...tic analysis. The researchers eliminated bias of alleles toward matching the human genome reference sequence, and determined genotypes on a single-sample basis to avoid preferential c...1143 days ago
- ...is longer than the molecule that is sequenced. Amplicon reads start with a primer sequence. Poly-A tails are useful for pulling out RNA from your sample, but often you don’t wa...
2965 days ago
RCircos: an R package for Circos 2D track plots
...track plots with R and could be easily integrated into other R data processing and graphic manipulation pipelines for presenting large-scale multi-sample genomic research data. It can...2958 days ago
- ...e analysis. The primer is also designed to be self-contained and hands-on, meaning that you only need to install SAMtools, and no other tools, and sample data sets are provided. Terms...
2924 days ago
EUKulele: Taxonomic annotation of the unsung eukaryotic microbes
EUKulele, an open-source software tool designed to assign taxonomy to microeukaryotes detected in meta-omic samples, and complement analysis approaches in other domains by accommodating assembly output and providing concrete metrics reporting the taxonomic completeness of each sample.1277 days ago
- ...verview page describes the one or more breakpoints which make up a structural variant. A breakpoint is defined as a region or point where the sample sequence has altered fro...
2823 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may contain h...nome assembly and for analysis of the biological diversity present in a sample. The newest sequencing techno...
2815 days ago
- ...nce and query sequences, along with any associated variant calls in the sample. This way Ribbon shows patter...in Supplementary Note 2. Figure 1b shows another complex event in this sample made simple in Ribbon: the tr...
2804 days ago
- ...s. The main output is a FASTA file of the (in frame) CDS portion of the sample for each target region, and a...rmation, please see our wiki. HybPiper is run separately for each sample (single or paired-end sequenc...
2790 days ago
