Next Generation Sequencing (NGS) Tutorials
...nbt.2134 NARWHAL, a primary analysis pipeline for NGS data htt...ng and SNP calling using Next Generation Sequence 10.1186/1...ract WEP: a high-performance analysis pipeline for whole-exome data...WSJd_WNM RNAseq Differential Gene Expression Introductory tutorial https...3514 days ago
Bioinformatics Algorithm Demonstrations and Tutorials
...oximate matching), Hierarchical Clustering (used in phylogenetic studies and microarray analysis of gene expression), a Naive Bayes Classifier for simulated microarray gene expression data, and a simple Neural N...3731 days ago
Latest paper on comparison of mapping tools
A. Hatem, D. Bozdag, A. E. Toland, U. V. Catalyurek "Benchmarking short sequence mapping tools"...als.org/content/28/24/3169 Some new Mapping tool links: GSNAP http://research-pub.gene.com...3923 days ago
3919 days ago
RNA Sequencing Helps Identify Functional Variants from GWAS
For Alzheimer’s and other complex disorders, mining the genome for disease-ass...ools for understanding how disease loci influence gene expression—a starting point for understanding their connection to pathogenesis.3843 days ago
Public Databases for Bioinformatics !
https://www.nature.com/articles/s41467-020-17155-yServer Inf...but on raid and data will never be deleted most analysis should be performed here /...is properly backed up ) intermediate analysis products that would be hard t...1166 days ago
Bioinformatics software for biologists in the genomics era
The genome sequencing revolution is approaching a landmark figure of 1000 c...ng infrastructure often employed for the analysis of large numbers of genes, long genomic segments and group...tware packages in molecular evolutionary analysis. Furthermore, biological intu...3813 days ago
3680 days ago
A Brief Bioinformatics Tutorial
This is about how to use a computer to find what is known about a gene of interest and also how to get new insights about...vestigate the function of a protein. i.e. finding interactors, co-expressed genes, s...3664 days ago
Orione – a web-based framework for NGS analysis in microbiology
End-to-end NGS microbiology data analysis require...ly, scaffolding, bacterial RNA-Seq, gene annotation and metagenomics. Howe...workflows for NGS microbiology data analysis. Enabling microbiology researchers to conduct their own custom analysis and data manipulation without...3601 days ago