2683 days ago
GroopM: Metagenomic binning toolset
...ically)extract population genomes from multi-sample metagenomic datasets. GroopM is largely parameter-free. Use: groopm -h for more info. For installation and usage instructions see :...2644 days ago
WGS Celera Assembler version 8.3rc2
...the software. The distribution is usable on most Unix-like platforms, and some platforms have pre-compiled binary distributions ready for installation.The source code package inclu...2610 days ago
CoreTracker, a codon reassignment tracker
...l possible reassignments in every genomes from the input set, and retain only the most promising one. Detailled information about the package, installation and tutorials are available h...2530 days ago
Perlbrew: admin-free perl installation management tool.
perlbrew is an admin-free perl installation management tool. The latest version is 0.79, read the release note:...changed by setting PERLBREW_ROOTenvironment variable before the installation and initialization. For more...2517 days ago
Ribbon: Visualizing complex genome alignments and structural variation:
...and assembly/genome alignments. Instructions for each data format are available by clicking on "instructions" in each tab on the right. Local installation: You can install Ribbon loca...2377 days ago
2365 days ago
DendroPy: a Python library for phylogenetic computing
...at: http://dendropy.org/ DendroPy is also hosted in the official Python repository: http://packages.python.org/DendroPy/ Requirements and Installation DendroPy 4.x runs under Pyth...2232 days ago
WhatsHap: fast and accurate read-based phasing
WhatsHap is a software for phasing genomic variants using DNA sequencing reads, also called read-based phasing or haplotype assembly. It is especially suitable for long re...2197 days ago
UPhO: Scripts for homology and orthology assessment from genomic sequences.
...orthologs with and without inparalogs from input gene family trees. Refer to the Documentation.pdf for more detailed explanations on its usage, installation and dependencies. Type UPhO.p...1966 days ago