P_RNA_scaffolder: a fast and accurate genome scaffolder using paired-end RNA-sequencing reads
...uitable for most genomes. The program could utilize Illumina Paired-end RNA-sequencing reads from target speciesies. Our method provides another practical alternative to existing mate-...2119 days ago
BASE: a practical de novo assembler for large genomes using long NGS reads
new de novo assembler called BASE. It enhances the classic seed-extension approach by indexing the reads efficiently to generate adaptive seeds that have high...2077 days ago
homologizer: Phylogenetic phasing of gene copies into polyploid subgenomes
...orial is an abbreviated version of a soon-to-be published paper in Methods in Molecular Biology. Please see that paper for many more details and practical considerations for running&nb...389 days ago
317 days ago