2980 days ago
PhyloGrapher - Graph Visualization Tool
...lationships within families of homologous genes or proteins (elements).PhyloGrapher is a drawing tool that generates custom graphs for a given set of elements. In general, it i...3002 days ago
2983 days ago
mrFAST: Micro Read Fast Alignment Search Tool
...how to choose the parameters and tune mrFAST with respect to the library settings. mrFAST is designed to find 'all' mappings for a given set of reads, however it can retu...2983 days ago
GATB : Genome Analysis Toolbox with de-Bruijn graph
The Genome Analysis Toolbox with de-Bruijn graph (GATB) provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core des...2980 days ago
2819 days ago
2969 days ago
Hagfish - assess an assembly through creative use of coverage plots
...of structural variation in a genome re-sequencing experiment. Hagfish requires a reference sequence and a paired end re-sequencing data set. Hagfish has more power the l...2958 days ago
2945 days ago
CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configuration and geno...2217 days ago