Results for "Statistical Data Analysis"
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Function WiseScaffolder is a stand-alone semi-automatic application for genome scaffolding of pre-assembled contigs using mate-pair data. It...2881 days ago
- FQC is software that facilitates quality control of FASTQ files by carrying out a QC p...roups samples in dropdowns for navigation among the data sets, utilizes human-readable...late the pages and tabs, and is extensible with CSV data.
1300 days ago
- Microbiome analysis using a single application MEGAN6 is a comp...omy such as SILVA Functional analysis using InterPro2GO, SEED, eggN...ng and networks Supports metadata MEGAN parses many different type...sequencing reads. Blast-like analysis can be performed using DIAMON...
2869 days ago
- Genome STRiP (Genome STRucture In Populations) is a suite o...l variations using sequencing data. The methods are designed to...detect shared variation using data from multiple individuals.Gen...ive and support heterogeneous data sets, including variations in...enomes, you need to call your data aga...
2826 days ago
- This tutorial includes resources for learning more about PacBio data and bioinformatics analysis, and includes content sui...Novo Assembly Transcriptome analysis Base Modification Analysis Barcoding Data Analysis Tools Minor Variants an...
2655 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open source...particular, Bambus is able to accept contig linking data other than specified by mate-...irectly use the output of MUMmer), physical mapping data, or...
2847 days ago
- KisSplice is a software that enables to analyse RNA-seq data with or without a reference ge...It has been tested on Illumina datasets of up to 1G reads. Its me...tments meant to facilitate the analysis of the results. The choice of...need to perform a differential analysis, as summarised in the followi...
2847 days ago
EUKulele: Taxonomic annotation of the unsung eukaryotic microbes
EUKulele, an open-source software tool designed to assign taxonomy to microeukaryotes detected in meta-omic samples, and complement analysis approaches in other domains by accommodating assembly output and providing concrete metrics reporting the taxonomic completeness of each sample.1254 days ago
- RepeatModeler is a de-novo repeat family identification and modeling package. At the h...t boundaries and family relationships from sequence data. RepeatModeler assists in aut...g the runs of RECON and RepeatScout given a genomic database...
2845 days ago
- Most variant calling pipelines result in files containing large quantities of variant...cf) is an increasingly popular format for this data. The format of these files an...eir content is discussed in the vignette ‘vcf data.&rs...
2844 days ago
