Biotite: A general framework for computational biology
The package is open source and freely available at GitHub (https://github.com/biotite-dev/biotite). This package is simple to use especially for the beginners in programming and computational...2026 days ago
Versatile genome assembly evaluation with QUAST-LG
QUAST-LG is an extension of QUAST intended for evaluating large-scale genome assemblies (up to mammalian-size). QUAST-LG is included in the QUAST ...2022 days ago
NanoPack: visualizing and processing long-read sequencing data
The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to sepa...2018 days ago
GenomeView: genome browser and annotation editor
...ort read alignments and graphs. Most major data formats are supported. Local and internet files can be loaded.This project has moved to GitHub: https://github.com/GenomeView/genomeview2010 days ago
EyeChrom: Visualizing Chromosome Count Data From Plants
...t the genus, and the plot will show the records found for it in the Chromosome Counts Database. note: Report an issue via Gihub: github.com/roszenil/CCDBcurator and github.com/RodrigoRivero/EyeChrom h...2004 days ago
Genome assembly tutorial "Genome Assembly for short and long reads"
...ta How to improve the accuracy of a long read assembly using short reads How to assess the quality of an assembly https://bioinformaticsdotca.github.io/high-throughput_biology_20...1993 days ago
1991 days ago
SvABA: Genome-wide detection of structural variants and indels by local assembly
SvABA is a method for detecting structural variants in sequencing data using genome-wide local assembly. Under the hood, SvABA uses a custom implementation of SGA&...1991 days ago
1990 days ago
GRAbB: Selective Assembly of Genomic Regions, a New Niche for Genomic Research
...homologous regions) of the new program are not matched by other programs. The program is available with explanatory documentation at https://github.com/b-brankovics/grabb. GRAbB...1986 days ago