2082 days ago
Referee: Genome assembly quality scores
Modern genome sequencing technologies provide a succint measure of quality at each...sembly. This allows for easy filtering of low quality sites for any downstream analysis. https://github.com/gwct/ref...2071 days ago
AMStat: display statistics of large sequence files from next generation sequencing projects
SAMStat is an efficient C program to quickly display statistics of large sequence...t from this SAMStat can be used to verify individual processing steps in large analysis pipelines.2067 days ago
ANItools web: a web tool for fast genome comparison within multiple bacterial strains
ANItools is a software package written by PERL scripts that can be run in a Linux/...rectly. Or you could send us the genome sequence by email. Then we will do the analysis work for you. https://academ...2062 days ago
2062 days ago
pWhatsHap: a parallel, high-performance version of WhatsHap
Given the potential relevance of efficient haplotyping in several analysis pipelines, we have designed and engineer...2062 days ago
SIMBA: a Genome Assembly Project Management System
SIMBA, SImple Manager for Bacterial Assemblies, is a Web interface for managing assembly projects of bacterial g...icians to assemble bacterial genomes sequenced with NextGeneration Sequencing (NGS) pla...2047 days ago
GWASpro: A High-Performance Genome-Wide Association Analysis Server
GWASpro supports building complex design matrices, by which complex experimental designs that may include replications, treatments, locations and times, can be accounted...2039 days ago
2035 days ago
SiLiX: implements an ultra-efficient algorithm for the clustering of homologous sequences
The software package SiLiX implements an ultra-efficient algorithm for the cl...llows the study of very large datasets. SiLiX is already included in the analysis pipeline for HOGENOM.2034 days ago