Breedbase is a comprehensive breeding management and analysis software
Breedbase is a comprehensive breeding management and analysis software. It can be used to design field layouts, collect phenotypic information using tablets, support the collection of genotyping sampl...1277 days ago
1270 days ago
1270 days ago
MMseqs2: ultra fast and sensitive sequence search and clustering suite
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein...sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux,...as beta version, via cygwin) Windows. The software is designed to run on multipl...1265 days ago
IVA: accurate de novo assembly of RNA virus genomes
IVA (Iterative Virus Assembler) designed specifically for read pairs sequenced at hig...ms all other virus de novo assemblers. Availability and implementation: The software runs under Linux, has the GPL...1110 days ago
QuasR: Quantification and annotation of short reads in R
The QuasR package (short for Quantify and annotate short reads in R) integrates the f...R packages (such as IRanges (Lawrence et al. 2013) and Rsamtools) and external software (e.g. bowtie, through th...1059 days ago
1047 days ago
RagTag: a collection of software tools for scaffolding and improving modern genome assemblies
RagTag is a collection of software tools for scaffolding and improving modern genome assemblies. Tasks include: Homology-based misassembly correction Homology-based assembly scaffolding and patching Scaffold merging1030 days ago
MMseqs2: ultra fast and sensitive sequence search and clustering suite
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein...sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux,...as beta version, via cygwin) Windows. The software is designed to run on multipl...1005 days ago
965 days ago