Results for "PA"
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...uickly analyzing thousands of intraspecific microbial genomes, including variant calls, recombination detection, and phylogenetic trees. Tools Parsnp - Core-genome alignm...2710 days ago
- ...e or contribute by reporting mistakes or sending patches. Language Reference &...ts describing, in detail, the various conceptual parts of the language. Type Ref...ack on Perl 6 source code. The Perl 6 homepage offers a comprehensive list...
2707 days ago
- ...cant alignments with other gene annotations. Compare all exons against all exons..., we use BLAT to do this all-vs-all comparison with alignments being pe...iques have been considered, cliques that are not part of a run are discarded. Th...
2704 days ago
FSA: Fast Statistical Alignment
...oining build a phylogeny using only pairwise divergence estimates, F...lds a multiple alignment using only pairwise estimations of homology...es to estimate gap and substitution parameters on the fly for each s...d movie at the top of the page). You can see more infor...2704 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a number of new features and analytical methods allowing extensive DNA p...2704 days ago
fineSTRUCTURE v2 & GLOBETROTTER
...ion 2, a pipeline for running ChromoPainter and FineSTRUCTURE for po...tation. Download from the Downloads page. FineSTRUCTURE R scripts,...ixture dating method based on ChromoPainter. Download from the Downl...oftware download from the Downloads page. What this page is This...2697 days ago
- maftools - An R package to summarize, analyze and visualize MAF files. Introduction. With adva...f genetic variants is stored in the form of Mutation Annotation Format. This package attempts to summarize, a...
2694 days ago
- ABACAS is intended to rapidly contiguate (align, order, orientate) , visualize and design primers to close gaps on shotgun assembled contigs based on a reference sequ...
2694 days ago
- ...cation that can display circular comparisons between a large number...rs on BRIG’s SourceForge page:http://sourceforge.net/trac...gs. BRIG will perform all BLAST comparisons and file parsing automa...data from multiple samples to be compared simultaneously
2694 days ago
- GenomeComp is a tool for summarizing, parsing and visualizing the genome wide sequence comparison results derived from volum...or strains.It can be easily used to compare, parsing and visualize larg...in one whole-genome DNA sequence by comparing the genome to itself.It i...
2693 days ago
