HECIL: A Hybrid Error Correction Algorithm for Long Reads with Iterative Learning
HECIL—Hybrid Error Correction with Iterative Learning—a hybrid error correction framework that determi...each iteration by incorporating knowledge gathered from previous iterations via data-d...2009 days ago
GenoViz: Visualization software for genomics
GenoViz provides software applications and re-usable components for data visualization and data sharing in genomics. Our flagship product is Integrated Genome Browser (IGB).For more information abou...2008 days ago
GenomeView: genome browser and annotation editor
GenomeView is a genome browser and annotation editor that displays reference sequence, annotation, multiple alignments, short read alignments and graphs. Most major data f...2008 days ago
2008 days ago
EXCAVATOR: detecting copy number variants from whole-exome sequencing data
EXCAVATOR, for the detection of copy number variants (CNVs) from whole-exome sequencing data. EXCAVATOR combines a three-step normaliza...ber states. We validate EXCAVATOR on three datasets and compare the results w...ariants (CNVs) from whole-exome sequencing data.E...2006 days ago
ZENBU: a collaborative, omics data integration and interactive visualization system
ZENBU is a data integration, data analysis, and visualization system enhanced for RNA...r types of next-generation-sequence-tag (NGS) based data. ZENBU allows for novel data exploration through "on-demand" data p...2006 days ago
kallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
...transcripts from bulk and single-cell RNA-Seq data, or more generally of target...of pseudoalignment for rapidly determining the compatibility of reads...alignment. On benchmarks with standard RNA-Seq data, kallisto can quantif...2003 days ago
2003 days ago
EyeChrom: Visualizing Chromosome Count Data From Plants
It's goal is to show chromosmal data per genus. Select the genus, and the plot will show the records found for it in the Chromosome Counts Databa...2002 days ago
1999 days ago