CoLoRMap: Correcting Long Reads by Mapping short reads
Second generation sequencing technologies paved the way to an exceptional increase in the number of sequenced gen...apped mates of mapped short reads. Our results on bacterial, fungal and insect data set...2145 days ago
LRCstats: a tool for evaluating long reads correction methods
LRCstats is an open-source pipeline for benchmarking DNA long read correction algor...ng reads are plagued by high error rates, which can cause issues in downstream analysis. Long read correction algorit...2143 days ago
Mulan: Multiple-sequence local alignment and visualization for studying function and evolution
Mulan: Multiple-sequence local alignment and visualization for studying function and e...Mulan supports two-way communication with the GALA database; alignments of multiple s...rated and overlaid with extensive genome annotation data usi...2141 days ago
2129 days ago
SeqMonk:A tool to visualise and analyse high throughput mapped sequence data
...enable the visualisation and analysis of mapped sequence data. It was written for use with...groups for visualisation and analysis Visualisation of mapped regi...etween data sets Statistical analysis of data to find regions of interest Crea...2123 days ago
Qualimap2: Evaluating next generation sequencing alignment data
Qualimap 2 is a platform-independent application written in Java and R that provides both a Graphical User I...mmand-line interface to facilitate the quality control of alignment sequencing data and...2123 days ago
2117 days ago
Heatmapper: web-enabled heat mapping for all
Heatmapper is a freely available web server that allows users to interactively visualize their data in the form of heat maps thro...riety of heat maps for many different data types and applications. Heatm...o interactively explore their numeric data val...2103 days ago
EvidentialGene: tr2aacds, mRNA Transcript Assembly Software
Quality assessment of this mRNA Transcript Assembly Software is described in EvidentialGene_quality. Too ma...now the only way to get it is to produce way too many assemblies on a good RNA data set...2103 days ago
S-plot2: Rapid Visual and Statistical Analysis of Genomic Sequences
S-plot2 creates an interactive, two-dimensional heatmap capturing the similarities and dissimilarities in nucleotide usage between genomic sequences (partial or complete...2102 days ago