1625 days ago
Genome in a Bottle (GIAB) Consortium
The Genome in a Bottle (GIAB) Consortium is a public-private-academic consortium ho...technical infrastructure (reference standards, reference methods, and reference data) to enable translation of who...1625 days ago
FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
FastGT is a program package for whole-genome genotyping of genome variants directly...s that are unique in human genome, counts the frequency of k-mers in sequencing data and predicts the genotype. Al...1623 days ago
vt: a variant tool set that discovers short variants from Next Generation Sequencing data.
vt is a variant tool set that discovers short variants from Next Generation Sequencing data. https://genome.sph.umich.edu/wiki/Vt https://github.com/atks/vt1623 days ago
1623 days ago
Nucleus: Python and C++ code for reading and writing genomics data.
Nucleus is a library of Python and C++ code designed to make it easy to read, write and analyze data in common genomics file forma...1617 days ago
Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
Rcorrector has an accuracy higher than or comparable to...-s seq_files: comma separated files for single-end data sets -1 seq_files_left: com...separated files for the first mate in the paried-end data sets -2 seq_files_right: co...1615 days ago
QuorUM: An Error Corrector for Illumina Reads
We produce trimmed and error-corrected reads that result in assemblies with longer...use of current multi-core computing architectures and it is suitable for large data sets (1 billion bases checked...1615 days ago
1612 days ago
The Global Alliance for Genomics and Health (GA4GH)
The Global Alliance for Genomics and Health (GA4GH) is a...organization, seeking to enable responsible genomic data sharing within a human rights...rk and allow us to convene the international genomic data sharing community. https://w...1611 days ago