FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
FastGT is a program package for whole-genome genotyping of genome variants directly from raw sequencing reads. It...s that are unique in human genome, counts the frequency of k-mers in sequencing data a...1619 days ago
vt: a variant tool set that discovers short variants from Next Generation Sequencing data.
vt is a variant tool set that discovers short variants from Next Generation Sequencing data. https://genome.sph.umich.edu/wiki/Vt https://github.com/atks/vt1619 days ago
1619 days ago
Nucleus: Python and C++ code for reading and writing genomics data.
Nucleus is a library of Python and C++ code designed to make it easy to read, write and analyze data i...1614 days ago
Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
Rcorrector has an accuracy higher than or comparable to existing methods, including th...-s seq_files: comma separated files for single-end data sets -1 seq_files_left: com...eparated files for the first mate in the paried-end data s...1612 days ago
QuorUM: An Error Corrector for Illumina Reads
We produce trimmed and error-corrected reads that result in assemblies with longer contigs and fewer errors. We co...use of current multi-core computing architectures and it is suitable for large data s...1612 days ago
1609 days ago
The Global Alliance for Genomics and Health (GA4GH)
The Global Alliance for Genomics and Health (GA4GH) is a policy-framing and technical...organization, seeking to enable responsible genomic data sharing within a human rights...k and allow us to convene the international genomic data s...1608 days ago
Leaflet: JavaScript libraries for interactive maps
Leaflet is one of the most popular open-source JavaScript libraries for interactive maps. Features Intera...asily render spatial objects from the sp or sf packages, or data f...1607 days ago
netGO: R-Shiny package for network-integrated pathway enrichment analysis
netGO is an R/Shiny package for network-integrated pathway enrichment analysis.netGO provides user-intera...ies (Human, Mouse, Arabidopsis thaliana,and Yeast)These data are available from netGO-Data&n...1604 days ago