1620 days ago
Nucleus: Python and C++ code for reading and writing genomics data.
Nucleus is a library of Python and C++ code designed to make it easy to read, write and analyze data in common genomics file forma...1615 days ago
Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
Rcorrector has an accuracy higher than or comparable to existing...-s seq_files: comma separated files for single-end data sets -1 seq_files_left: com...parated files for the first mate in the paried-end data sets -2 seq_files_right: co...1612 days ago
QuorUM: An Error Corrector for Illumina Reads
We produce trimmed and error-corrected reads that result in assemblies with longer contigs a...se of current multi-core computing architectures and it is suitable for large data sets (1 billion bases checked...1612 days ago
1609 days ago
The Global Alliance for Genomics and Health (GA4GH)
The Global Alliance for Genomics and Health (GA4GH) is a policy-f...rganization, seeking to enable responsible genomic data sharing within a human rights...and allow us to convene the international genomic data sharing community. https://w...1609 days ago
Leaflet: JavaScript libraries for interactive maps
Leaflet is one of the most popular open-source JavaScript libraries for interactive map...ily render spatial objects from the sp or sf packages, or data frames with latitude/longitud...1607 days ago
netGO: R-Shiny package for network-integrated pathway enrichment analysis
netGO is an R/Shiny package for network-integrated pathway enrichment analysis.netG...s (Human, Mouse, Arabidopsis thaliana,and Yeast)These data are available from netGO-Data repository. https://aca...1604 days ago
1604 days ago
LoFreq*: A sequence-quality aware, ultra-sensitive variant caller for NGS data
LoFreq* (i.e. LoFreq version 2) is a fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data. It makes full use of base-ca...1599 days ago