TULIP - The Uncorrected Long read Itegration Pipeline
#Running TULIP (The Uncorrected Long-read Integration Process), version 0.4 late 2016 (European eel) TULIP currently consists of to Perl scripts, tulipseed.perl and tulipbulb.perl. These are ver...2382 days ago
MinION_GC: An R script to do some QC on MinION data
Other tools focus on getting data out of the fastq or fast5 files, which is slow and computationally intensive. The benefit of this approach is that it works on a singl...2372 days ago
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Building Web UIs With Mojolicious Perl
...ng web frameworks available in the perl ecosystem (along with Dancer...tall, has an applciation generator script and many plugins and extens...Web application framework for mod_perl, cgi, etc. Kossy - A We...e framework. Poet - a modern Perl web framework for Mason develop...2349 days ago
Frontend: Perl Web framework documentation - Andrej Sali Lab
The frontend is a set of Perl classes that displays the web interface, allowing a user to upload their...ice. This class is then used to display the web pages using a set of CGI scripts that are set up automaticall...2335 days ago
mojolicious: a next generation web framework for the Perl programming language.
Back in the early days of the web, many people learned Perl because of a wonderful Perl library called CGI. It was simple eno...ox with RESTful routes, plugins, commands, Perl-ish templates, content negoti...y clean, portable and object-oriented pure-Perl A...2332 days ago
Dot, an interactive viewer for genome-genome comparison
Dot, an interactive dot plot viewer that allows genome scientists to visualize genom...the most commonly used software method for aligning genome assemblies. A quick script called DotPrep.py converts th...2330 days ago
RGFA: powerful and convenient handling of assembly graphs
RGFA, an implementation of the proposed GFA specification in Ruby. It allows the use...ch the assembly of a repetitive metagenomic fosmid insert was completed using a script based on RGFA. https://githu...1594 days ago
Circoletto: visualizing sequence similarity with Circos
Circoletto, an online visualization tool based on Circos, which provides a fast, aesthetically pleasing and inform...nline version and downloadable software package for offline use (source code in PERL)...2304 days ago