Awesome bioinformatics pipelines !
A curated list of awesome pipeline toolkits ... https://github.com/pditommaso/awesome-pipeline2986 days ago
QUAST: quality assessment tool for genome assemblies
QUAST evaluates genome assemblies. For metagenomes, please see&nbs...comparison. More at http://bioinf.spbau.ru/quast http://bioinformatics.oxfordjournals.org/content/early/2013/03/09/bioinformatics.btt086.long2979 days ago
2970 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was buil...o make RAST a more useful research tool and to keep pace with advancements in bioinformatics, it has become desirable to b...2958 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, comput...0). Genome-wide synteny through highly sensitive sequence alignment: Satsuma. Bioinformatics, 26(9), 1145-51. Tutorial at...2942 days ago
2934 days ago
Bpipe - a tool for running and managing bioinformatics pipelines
...des a platform for running big bioinformatics jobs that consist...ines'. January 20th, 2016 - New! Bpipe 0.9.9 released! Download latest,...Bpipe has been published in Bioinformatics! If you use Bpipe, please cit...Tool for Running and Managing Bioinformatics Pipelines, Bioinformatics...2934 days ago
2933 days ago
2911 days ago
CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a r...oal@gmail.com Supplementary information: Supplementary data are available at Bioinformatics online.2908 days ago