Awesome bioinformatics pipelines !
A curated list of awesome pipeline toolkits ... https://github.com/pditommaso/awesome-pipeline3004 days ago
QUAST: quality assessment tool for genome assemblies
QUAST evaluates genome assemblies. For metagenomes, please see MetaQUAST project.It can w...on. More at http://bioinf.spbau.ru/quast http://bioinformatics.oxfordjournals.org/content/early/2013/03/09/bioinf...2997 days ago
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RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to...order to make RAST a more useful research tool and to keep pace with advancements in bioinf...2976 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignment...K. (2010). Genome-wide synteny through highly sensitive sequence alignment: Satsuma. Bioinf...2960 days ago
2951 days ago
Bpipe - a tool for running and managing bioinformatics pipelines
Bpipe provides a platform for running big bioinformatics jobs that consist of a series of processing stages -...g List (Google Group) Bpipe has been published in Bioinfo...p; Oshlack A, Bpipe: A Tool for Running and Managing Bioinf...2951 days ago
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CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a range of appl...s - sauloal@gmail.com Supplementary information: Supplementary data are available at Bioinf...2926 days ago