Biotite: A general framework for computational biology
...). This package is simple to use especially for the beginners in programming and computationally efficient because of the im...e. The Biotite package bundles popular tasks in computational biology into an unifying fr...2017 days ago
LTR_Finder: an efficient program for finding full-length LTR retrotranspsons in genome sequences.
LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome...uild-in aligning and counting modules. RT identification includes a dynamic programming to process frame shift. For o...1991 days ago
1983 days ago
iRNAD: a computational tool for identifying D modification sites in RNA sequence
iRNAD, for identifying D modification sites in RNA sequence. In this predictor, the RNA samples derived from five species were encoded by nucleotide chemical property and nucleotide density. Support vector machine was utilized to perform the classification. http://lin-group.cn/server/iRNAD/1868 days ago
MGERT: Mobile Genetic Elements Retrieving Tool
MGERT is a computational pipeline for easy retrieving of MGE's coding sequences of a particular family from genome assemblies. MGERT utilizes several established bioinformatic tools combined into single pipeline which hides different technical quirks from an inexperienced user.1866 days ago
Apollo: a sequence annotation editor
The well-established inaccuracy of purely computational methods for annotating genome sequences necessitates an interactive tool to allow biological experts to refine these app...1765 days ago
Shouji: a fast and efficient pre-alignment filter for sequence alignment
...genomes. We introduce Shouji, a highly parallel and accurate pre-alignment filter that remarkably reduces the need for computationally-costly dynamic programming algorithms. The first key ide...1696 days ago
Bioinformatics web development course
This web development course, targeted at Biology and Bioinform...eb applications for Bioinformatics. No previous programming knowledge is assumed. By foll...orial you will learn the fundamental concepts of programming by using scripting languages:...1693 days ago
Seq: A high-performance, Pythonic language for bioinformatics
Seq is a programming language for computational genomics and bioinformatics. With a Python-compatible syntax and a host of domain-specific features and optimizations, Seq makes...1677 days ago
1673 days ago