3299 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependencies....ions (default version)python-biopython-sql - Biopython support for the BioSQL database...4004 days ago
Computational Proteomics : Lets remember the basics
I spend some of my valuable time in computational drug designing sector. I remember my initial proteomics days, playing with interactive protein visualization software and dreaming big. Fortunately...3541 days ago
3962 days ago
A Brief Bioinformatics Tutorial
This is about how to use a computer to find what is known about a gene of interest and also how to get new insights...ok efficiently for a particular protein sequence, how to blast it against the database...3690 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinforma...), Gene Ontology(Bio::GO), PDB (Bio::PDB), FANTOM database(...4001 days ago
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100K Foodborne Pathogen Genome Project
The 100K Genome Project, led by the University of California, Davis, the U.S. Food and Drug Administration’s C...ed genome sequences of foodborne disease-causing microorganisms to its public database...3977 days ago
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Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.... BLAST : Eak khoj Munn...nce aapke pass hai. BLAST To Hona Hi Tha !! Meri Gene Tumhare Paas Hai Aao Database...3972 days ago
3755 days ago
Bioinformatics 101 - Running BLAST
How to format the database for BLAST, run the command, view the output file, and use BioPerl and Perl to parse the output. By David Francis, Ohio State University. Deliv...3950 days ago
3960 days ago
Retrieve NCBI GenBank records with a range of accession numbers
#!/usr/bin/perl #FILE: ncbi_search.pl #AUTH: Paul Stothard (paul...outputFile => undef, database => undef, returnType =...\$param{outputFile}, 'd|database=s' => \$param{database},...) or !( defined( $param{database} ) ) or !( defined( $par...2970 days ago
Converting from Windows-style to UNIX-style line endings with dos2unix
Lenovo-ideapad-320-15ISK:~/Downloads/abc/bin$ sudo apt install dos2unix [sudo] password for bioqueen: Reading...3s (130 kB/s) Selecting previously unselected package dos2unix. (Reading database...1230 days ago
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