Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3999 days ago
DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment and for variant calling. We have evaluated the perform...s used for bench-marking. We further demonstrate that while existing tools are based o...1195 days ago
Rdatamining.com : R and Data Mining
This website presents examples, documents and resources on data mining with R. Docum...ng R Reference card for Data Mining, R and Data Mining: Examples and Case Studies and Time Series Analysis and...3965 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NGS workshop tuto...uencing data PubMed: 21478889 SNiPlay: a web-based tool for detection, managemen...1 DDBJ read annotation pipeline: a cloud computing-based p...3537 days ago
Bioinformatics Algorithm Demonstrations and Tutorials
Abstract This project presents demonstrations of selected computer science algorith...D numeric approximate matching), Hierarchical Clustering (used in phylogenetic studies and microarray analysis...3753 days ago
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Phylogenomics/Phylogenetic website
Welcome to phylobabble.org, a discussion forum for phylogenetic theory and applications. The primary goal of this forum is to discuss best practice and new developmen...3730 days ago
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Orione – a web-based framework for NGS analysis in microbiology
End-to-end NGS microbiology data analysis requires a diversity of tools covering bacter...hers at CRS4, Italy have developed Orione, a Galaxy-based framework consisting of publi...A, Uva P, Zanetti G, Fotia G. (2014) Orione, a web-based f...3623 days ago
COSMOS, our workflow management system for NGS data
COSMOS, our Python-based management system for implementing large-scale parallel workflows focusing on, but not restricted to, large-scale short-read "NGS" sequencing d...3623 days ago