Nextflow: Data-driven computational pipelines
Nextflow enables scalable and reproducible scientific workflows using software contain...d reactive workflows on clouds and clusters. More at https://github.com/nextflow-io/nextflow...1568 days ago
993 days ago
992 days ago
pipesnake: bioinformatics best-practice analysis pipeline for phylogenomic reconstruction
...'second-generation' sequencing data. The pipeline is built using Nextflow, a workflow tool to run tasks...making installation trivial and results highly reproducible. The Nextflow DSL2 implementation of t...105 days ago
Bactopia: a Flexible Pipeline for Complete Analysis of Bacterial Genomes
...a Analysis Pipeline, and Bactopia Tools. Bactopia Analysis Pipeline is the main per-isolate workflow in Bactopia. Built with Nextflow, input FASTQs (local or avail...21 days ago