HOMER: Software for motif discovery and next-gen sequencing analysis
...e which is important to know before diving head first into more advanced analysis tools such as HOMER. Setting up your computing environment Retrieving and storing sequencing files&...2985 days ago
GeneProf: analysis of high-throughput sequencing experiment
...rkflow framework (cp. Section 'Module Development: Adding new..') and data from GeneProf may be used externally (cp. Section 'Web API: Retrieving Data from ..'). Ge...2550 days ago
Genome Assembly Tools and Software - PART2 !!
...oftware for assembling and scaffolding Illumina sequencing data of microbial communities. TCGA-Assembler 1.0.3 – Open-Source Software for Retrieving and Processing TCGA DataTCGA-...2740 days ago
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Retrieve NCBI GenBank records with a range of accession numbers
...Records} ) { message( $param{verbose}, "Retrieving $param{maxRecords} records ou...else { message( $param{verbose}, "Retrieving $count records out of $count...2970 days ago
MGERT: Mobile Genetic Elements Retrieving Tool
MGERT is a computational pipeline for easy retrieving of MGE's coding sequences of a particular family from genome assemblies. MGERT utilizes several established bioinformatic tools combined into single pipeline which hides different technical quirks from an inexperienced user.Tags: MGERT, Mobile, Genetic, Elements, Retrieving, Tool
1868 days ago
Retrieving Taxonomic Information with R
This vignette will introduce users to the retrieval of taxonomic information with myTAI. The taxonomy() function implemented in myTAI relies on the powerful package taxize. Nevertheless, taxonomic information retrieval has been customized for the myTAI stan...Tags: Retrieving, Taxonomic, Information, R, myTAI
1765 days ago