Comment on "Run miniasm assembler on nanopore reads !"
...occurrences: 7.475; average spacing: 2.940[M::worker_pipeline...occurrences: 7.298; average spacing: 2.937[M::worker_pipeline...occurrences: 3.628; average spacing: 2.938[M::worker_pipeline...sm/miniasm -f both.fastq AONT.paf[M::main] Real time: 168.768...2345 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...Output options: -r, --ref STR Path to the reference sequence (...if it already exists in given path. [false] --auto-rebuild-ind...s can be located on different paths, and their overlap still s...be turned off by setting this parameter to 0. Different values...2356 days ago
Comment on "List of genome announcement, notes and reporting journals"
The "Genomic Data" journal also publish genome announcement https://www.journals.elsevier.com/genomics-data/2373 days ago
Comment on "BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries"
One more intersting approach by Sonal Singhal @ https://github.com/CGRL-QB3-UCBerkeley/denovoTargetCapturePopGen/blob/master/2-ScrubReads2378 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Methods journals also accept bioinformatics papers https://www.journals.elsevier.com/methods2385 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Informative bioinformatics bloggers Diving into Genetics and Genomics YOKOFAKUN Getting Genetics Done Gigabase or gigabyte Genome Spot CoreGenomics...2385 days ago
Comment on "Virtual Bioinformatics Online Tutorial"
Bioinformatics online training resources Cancer Research UK Cambridge Bioinformatics core facility HarvardX Biomedical Data Science Open Online Training SIB...2385 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
My collection of biology journals NatureNature GeneticsNature MedicineNature BiotechnologyNature Reviews GeneticsNature methodsNature CommunicationsBioinf...2391 days ago
2408 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
PeerJ also accept bioinformatics papers https://peerj.com2411 days ago