Converting a VCF into a FASTA given some reference !
...tools (Heng Li) provides a Perl script vcfutils.pl which does this, the function vcf2fq (lines 469-528) This script has been modified by others to convert InDels a...2156 days ago
Encode sequencing data freely available to download and use for academic means
...ia DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that interact with DNA, including modified histones and transcription fa...3746 days ago
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Find certain files/documents in Linux OS
...ind /home -user rahul -iname "*.txt"Part IV – Find Files and Directories Based on Date and Time26. Find Last 50 Days Modified FilesTo find all the files which are modified 50 days back.# find / -mtime...3721 days ago
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List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, and shared (in modified or unmodified form) by anyone. Open source software is made by many people, and distributed under li...3797 days ago
List of In-silico Binding Site Prediction Tools
...y for understanding the function of the molecule in detail but also for structure-based design of possible ligands and potential drugs as well as modified protein molecules. While ther...3784 days ago
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JRF Position – International Institute of Information Technology, Hyderabad
...oject: Insight into the Structure–Function Relationships of Chemically Modified Nucleic Acids: A Molecular Dy...e project involves theoretical modelling and simulations on chemically modified nucleic acids to investigate...3216 days ago
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Genetic Modified (GM) Food/Organisms
...engineering is considered to be a genetically modified organism (GMO). The first GMO...a were commercialized in 1982 and genetically modified food has been sold since 1994...it. http://en.wikipedia.org/wiki/Genetically_modified_food http://en.wikipedia.org...3959 days ago
Comment on "Sibelia: A comparative genomics tool"
...blocks In this case Sibelia doesn't compute the synteny blocks and doesn't ouput them, but can output the graph. For example, to get only non-modified compressed de Bruijn grahp f...1325 days ago
Comment on "Most Commonly used Awk by Bioinformatician"
I love awk but recommend you to try bioawk . Bioawk is a modified version of awk which will parse some common sequence formats. https://github.com/lh3/bioawk3721 days ago