2391 days ago
ASAR: Advanced metagenomic Sequence Analysis in R
...ion, aggregation and visualization of metagenomic data is presented. Functional analysis with a SEED hierarchy and pathway diagram based on KEGG orthology based upon MG-RAST annotation...2154 days ago
BioRuby :Ruby packages for biologist
.... Classes for Multiple alignment (Bio::Alignment), Gene Ontology(Bio::GO), PDB (Bio::PDB), FANTOM database(Bio::FANTOM), GFF (Bio::GFF) and KEGGOrthology (Bio::KEGG::KO). They also a...3974 days ago
Tools for bacterial whole genome annotation
...BlastKOLA: Assigns K numbers to the user's sequence data by BLAST searches, respectively, against a nonredundant set of KEGG GENES. KOALA (KEGG Orthology And Links Annotation) is KEGG...2359 days ago
3946 days ago
3924 days ago
Visiting Scientist - Computational Genomics (two positions)
...ogy and metabolic pathway analysis Epigenome analysis, small RNA identification Gene family analysis, sequence level protein analysis, orthology/paralogy and molecular modell...3616 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Orthology Detection Combining Clustering and Synteny for Very Large Datasets http://journals.plos.org/plosone/article?id=10.1371/journal.pone.01050153026 days ago