Results for "topology"
Blogs
List of motif discovery tools !
...in a given protein sequence. Phobius -- A combined transmembrane topology and signal peptide predictor Predict combined transmembrane topology and signal peptides. Pho...2035 days ago
Bookmarks
Delta: a new Web-based 3D genome visualization and analysis platform
...ausible consensus 3D structure of the genome. Deltafeatures a highly interactive visualization tool which enhances the integration of genome topology/physical structure with exten...2370 days ago
oGNM:Conformational dynamics based on contact topology in a coarse-grained presentation
Gaussian Network Model (GNM) is a powerful tool to sample conformational dynamics based on contact topology in a coarse-grained presentation. Here we present a method to consider prote...881 days ago
Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
...ns-membrane MM, correctly predicts the entire topology for 77% of the sequences in a...andard dataset of 86 proteins with supervised topology. These results compare favora...re the information which encodes the membrane topology, and gain a better understand...3987 days ago
Top-level pages
- ...e models are usually mostly correct; however, it is possible to have 50% identity between two carefully designed protein sequences with different topology (the so –called JANUS p...
3990 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...n directly from unassembled raw sequence data from whole genome sequencing projects; provides bootstrap support to assess uncertainty in the tree topology (k-mer based) Software (Pyth...2413 days ago
ResearchLabs posts
- ...and computational algorithms for efficient extraction of function from topology of complex real-world network...putational and systems biology: studying the interplay between network topology and biological function, dise...
3943 days ago
