Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
The FindMotif.pl program uses position-specific scoring matrices to search for sequences similar to a consensus sequence. Find more at http://www.people.vcu.edu/~elhaij/IntroBioinf/Notes/PSSM-Perl.html3698 days ago
Comment on "A Brief Bioinformatics Tutorial"
Bioinformatics tutorial at http://nihlibrary.nih.gov/Services/Bioinformatics/Pages/Biotutorials.aspx3698 days ago
Comment on "List of popular bioinformatics software/tools"
TopHat http://tophat.cbcb.umd.edu/manual.shtml is a program that aligns RNA-Seq reads to a genome in order to identify exon-exon splice junctions. It is built on the ultrafast short read mapping program Bowtie.3710 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
Bioinformatics algorithms at www.users-birc.au.dk/cstorm/students/Vesterstroem_Mar2006.pdf www.proteomics.bioengr.uic.edu/people/ezra/cv/thesis_uic.pdf3710 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Parallelized pairwise sequence alignment using CUDA on multiple GPUs http://www.biomedcentral.com/1471-2105/10/S7/A33710 days ago
Comment on "R and Bioconductor Tutorial"
A self learn R tutorial at http://www.nceas.ucsb.edu/files/scicomp/Dloads/RProgramming/BestFirstRTutorial.pdf3721 days ago
Comment on "Most Commonly used Awk by Bioinformatician"
Some of the useful Unix onliner http://genomics-array.blogspot.in/2010/11/some-unixperl-oneliners-for.html3724 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Bioinformatics algorithms coursera https://github.com/jschendel/bioinformatics-algorithms-coursera3727 days ago
3731 days ago
Comment on "R and Bioconductor Tutorial"
...; Reading in complete genomes and BioC annotation data [3] DEGSeq – Identify differentially expressed genes from RNA-Seq data. [4] IRanges – infrastructure for positional data....3732 days ago