Results for "preprocessing"
Blogs
Bioinformatics tools for telomere to telomere assembly !
...)● SQANTI3 – an automated pipeline for the classification of long-read transcripts that can assess the quality of data and the preprocessing pipeline (Rocío Amor&i...1020 days ago
Bookmarks
- ...ferent taxa. Blobsplorer is unlikely to be of use on its own as it requires contig data to be supplied in a format that involves considerable preprocessing (see below for a description)...
2910 days ago
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a cell x gene or cell x transcript equivalence class count matrix Perform RNA velocity and sing...1154 days ago
- +2 more Bookmarks
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...010 PubMedCentral Two-stage Poisson model for testing RNA-seq data. Auer and Doerge, SAGMB 10(1), article 26 Full Text Experimental design, preprocessing, normalization and differenti...3808 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...termediate VCF Output: VCF MuTect Description: Broad Institute, identification of somatic point mutations in cancer genomes; requires preprocessing of reads (GATK) Input: same...2937 days ago
News
RNA-Seq Data Pathway and Gene-set Analysis Workflows
...orial, “RNA-Seq Data Pathway and Gene-set Analysis Workflows“. First cover a full workflow from preparation, reads counting, data preprocessing, gene set test, to pathway vi...3862 days ago
Comments
Comment on "List of popular bioinformatics software/tools"
EpiExplorer is a web tool that allows you to use large reference epigenome datasets for your own analysis without complex scripting or laborous preprocessing. http://epiexplorer.mpi-inf.mpg.de/3710 days ago
