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Reverse Complement Problem Solved with Perl
Question at http://rosalind.info/problems/1b/ #Find the reverse complement of a DNA string.#Given: A DNA string Pattern.#Return:...omplement of Pattern.use strict;use warnings;my $string="AAAACCCGGT";m...sp; "T" => "A", "G" => "C",);for (my $a...3280 days ago
Frequent words problem solution by Perl
...Solved with perl http://rosalind.info/problems/1a/ #Find the most frequent k-mers in a string.#Given: A...ng Text and an integer k.#Return: All most frequent k-mers in...ax=0;for (my $aa=0; $aa<=(length($string)-4); $aa++) { ...sp; $myHash{$myStr}=$km; }#Print all k...3280 days ago
Pattern Matching Problem Solution with Perl
Problem at http://rosalind.info/problems/1c/ #Find all occurrences of a pattern in a string.#Given: Strings Pattern and Genome.#Return: All starting pos...-based indexing.use strict;use warnings;my $string="GATATATGCATAT...mer)=@_;for (my $aa=0; $aa<=(length($string)-$kmer); $aa++) {&...3280 days ago
Clump Finding Problem Solved with Perl
The question at http://rosalind.info/problems/1d/ Script are moved to http://bioinformaticsonline.com/snippets/view/34633/clump-finding-problem-solved-with-perl2361 days ago
Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as the input. Since the quality-value f...llow the AMOS project to continually grow and improve in hope...nds; local assembly of reads into new contigs; reference cont...2713 days ago
Awesome perl frameworks, libraries and software - PART 2
licheng/gccfilter - gccfilter is a perl filter to colorize and simplify (or expand) gcc diagnostic messages. gccfilter is p...le Perl client for grabbing content out of Wikipedia domm/Ga...beautifier for javascript) ding-lab/hotspot3d - 3D hots...2522 days ago
Awesome perl frameworks, libraries and software - PART 3
...fujiwara/perl-queue-q4pg-lite - simple message queue using PostgreSQL. formbuilder/formbuilder - Perl CGI::FormBuilder mo...axMind's GeoIP2 web services and databases maros/CatalystX-I...nitoring-Generator-TestConfig - Perl extension for gener...2522 days ago
Awesome perl frameworks, libraries and software - PART 4
tjstein/php5-fpm-munin-plugins - A set of Munin plugins for PHP5-FPM perusio/nginx-munin - A set of plu...ies for myself gknops/adHocGenerate - Wireless ad hoc d...plugins justingit/dada-mail - Dada Mail is a simple, w...ly just data dumps at the moment, but if you have something t...2522 days ago
Awesome perl frameworks, libraries and software - PART 5
robelix/sub2srt - subtitle converter reyjrar/graphite-scripts - A Collections of Scripts...p-htmlcat - redirect stdin to web browser moose/Moo&nbs...tem watcher mhop/fhem-mirror - Branch 'master' is a rea...ct. goccy/p5-Compiler-Parser - Create Abstract Syntax T...2522 days ago
- As I mentioned earlier, I will keep on posting one Python script per day to introduce you to Python programming. Whether you are an experienced programmer or not, this tu...ing language. Python is a very simple language, and has a very straight...
2210 days ago
