4001 days ago
Commercial and public next-gen-seq (NGS) software
...ahaSNP is a polymorphism detection tool. It detects homozygous SNPs and indels by aligning shotgun reads to the finished genome sequence. Highly repetitive elements are filtered out by...3574 days ago
Software packages for next gen sequence analysis
...ahaSNP is a polymorphism detection tool. It detects homozygous SNPs and indels by aligning shotgun reads to the finished genome sequence. Highly repetitive elements are filtered out by...3297 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ns, can perform variant calling at chrX; Input: VCF Output: VCF GeneticThesaurus Description: “Annotation of genetic variants in repetitive regions” Input: Initia...2964 days ago
Tools for Searching Repeats And Palindromic Sequences
...s scientists discovered that many genomes contain stretches of highly repetitive DNA sequences ( see Reassocia...etrotransposons ( LINES ) Currently up to 50% of the human genome is repetitive in nature and as improvements...2266 days ago
Genome Assembly Tools and Software - PART1 !!
..., while extending paire-end read into long reads for assembly through repetitive regions. REAPR 1.0.18 &n...enome assemblies by automating the closure of sequence gaps caused by repetitive regions in the DNA. Meraculo...2741 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...elatedness -- Two clades are more closely related when they share a more recent common ancestor between them than they do with any other clade. repetitive DNA -- Sequences of DNA that...2517 days ago