3990 days ago
Next generation sequencing in R or bioconductor environment
...nfrastructure are countOverlaps and summarizeOverlaps. For their proper usage, it is important to read the...ad counting per genome feature) DEXSeq (Inference of differential exon usage); parathyroidSE explains...3668 days ago
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2917 days ago
Genome Assembly Tools and Software - PART1 !!
...to specific data structure. Currently, existing data structure for this usage can be predominantly classifi...as soil. It makes use of succinct de Bruijn graph to achieve low memory usage, whereas its goal is not to m...2729 days ago
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Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
...er — display information about user man command — show the manual for command df — show disk usage du — show directory space usage free — show memory...2324 days ago
LINKS scaffolder bloomfilter setting !
...oomFilter.so -O3 ➜ swig git:(master) ✗ cd .. ➜ bloomfilter git:(master) ✗ cd .. ➜ lib git:(master) ✗ cd .. ➜ bin git:(master) ✗ ./LINKS Usage: ./LINKS [v1.8.6] -f sequen...2194 days ago
Parallel Processing with Perl !
...:ForkManager. You can use Parallel::ForkManager to manage the number of forks you want to generate (number of processors you want to use). Simple usage:use Parallel::ForkManager;my...2123 days ago