3989 days ago
3989 days ago
Best book Titles for Learning Bionformatics
Nothing can add to our intellect more than reading a book. In books, we can experience new things that we w...ll, Joseph Sambrook (Editors), 2002, Cold Spring Harbor Laboratory DNA Array Image Anal...3960 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quantitative ge...Home Page FASTX-toolkit: FASTQ/A short-reads pre-processing tools Home Page Reference-fr...1), article 26 Full Text Experimental design, preprocessing, normalization and differenti...3822 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief description and homepage ALF A Simulation Framew...tion viability analysis (PVA). http://www.vortex9.org/vortex.htmlReferences: Image www....3780 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Proteins tools CASTp : http://sts.bioengr.uic.edu/castp/ Computed Atlas of Surface Topography of pro...3787 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of...ChIP-Seq Pipeline: PICS, rGADEM and MotIV (developer web site) SPP: ChIP-seq processing pipeline SPP Tutorial MACS...3667 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to understand the different processes inside a cell: proteins exert their function not in isolation but in a tightly controlled...2330 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...int mutations in cancer genomes; requires preprocessing of reads (GATK) Input:...ls-- don’t need to do this type of pre-processing Output: pair of VCF files...or of SNPs, and chose to show genes Output: Imagefile CanvasDB Description:...2951 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation GeneSCF serves as command line tool for clustering the list of genes given by t...2914 days ago