Results for "Arabidopsis data"
Top-level pages
Most Commonly used Awk by Bioinformatician
Awk is a programming language that is specifically designed for quickly manipulating space delimited data. Although you can achieve all...3966 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation q...842, 2010. Publisher Website Data quality assessment, filtering...m massively parallel sequence data. Gnerre et al, PNAS 108(4): 1...expressed genes from RNA-seq data. Wang et al., Bioinformatics....toring and searching sequence data in the cloud. OConnor et al,...3833 days ago
List of bioinformatics open source projects/software.
Open source software is software that can...-based workflow framework for data analysis Armadillo workflow...tics platform and graph based database built around most data av...ttps://github.com/biorails a data management system designed to...xploration of diverse genomic data IntAct http://www.ebi.ac.uk...3810 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools...n size reductions from allele data frequencies http://www.ensam....ed model intended to simulate datasets under a very broad range...that simulates sequence-like data over large genomic regions in...osition of typical metagenome data sets http://ab.inf.uni-tuebin...3790 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Bindi...cket.uchicago.edu/fpop/) is a database of the protein functional...odelling.leeds.ac.uk/sb/ is a database of known ligand binding s...query protein to members of a database of protein 3D structures...ween surfaces from coordinate data supplied in a PDB file. MSPo...3797 days ago
Linux for bioinformatician !!!
Linux, free operating system for computers, provides several powerful admin tools and uti...manage your systems effectively and handle huge amount of genomic/biological data with an ease. The field of bi...3758 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing data most of the bioinformaticians mung and wrangle around massive amounts of genomics text. There are several "standardized" file formats...3681 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as...nd information and annotation data. Documentation Motif...AM formatted binary alignment data. SAM/BAM is quickly becoming...ing sample code uses the test data set from the above BayesPeak...3678 days ago
Commercial and public next-gen-seq (NGS) software
...Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software th...Illumina, SOLiD and Roche-FLX data formats and allows the user t...ser/Alignment Viewer/Assembly Database EagleView - An informatio...Bisulphite Sequencing of the Arabidopsis Genome Reveals DNA Met...3572 days ago
- Since few years miRNA has shown to play important role in ther...Bs and tools related with miRNA: miRNA Sequencing data analysis : http://tools....rediction.html Idea of analysing miRNA Sequencing data : http://www.illumina.com/ap...
3549 days ago
