2393 days ago
Tools for bacterial whole genome annotation
...l, takes just a few minutes per genome. This is the best way to get good quality annotation in a flash...enome. Note however that the quality of functional information is not as good as RAST, and you will ne...2374 days ago
Bioinformatics Web Application Development with Perl
...alue with all three. These are neither the only good possibilities (think of POE o...ojo::UserAgent for more). Yet if you want three good options to choose between, st...Apache, Apache 2, nginx, or anything else. Any good modern Perl web framework (in...2364 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
...ash; no permissions chmod 600 file — you can read and write - good for files chmod 700 file — you can read, write, and execute - good for scripts chmod 644 file&nb...2323 days ago
Installing Bio::SCF perl module
...rl Makefile.PLmakemake testmake install jitendra@jitendra-UNLOCK-INSTALL[Bio-SCF-1.01] perl Makefile.PL []Checking if your kit is complete...Looks goodGenerating a Unix-style Makefi...2261 days ago
Tools for Protein-Protein Docking !
...on of conformations. Refinement of interface side-chains and re-scoring MolFit Global rigid search: FFTShape complementarity Clustering of good solutions, filtering using&nb...2245 days ago
Gap filling or Contigs extensions tools !
...ere are also some tools like GAPresolution that can help to perform local re-assemblies using 454 reads. We used GAPresolution but it is not a very good software, it is useful only i...2207 days ago
Ancestral sequence reconstruction steps !
...ftware/source.html" mafft --maxiterate 1000 --reorder --thread 24 --genafpair Dataset.fasta > Dataset_Alig.fasta 2- Your dataset has a good phylogenetic signal, is possi...2221 days ago
2105 days ago