Phylogenetic & Molecular Genetics Terms and Definitions
...that gave rise to all other animals. biological classification -- The orderly arrangement of organisms in...hared derived state). synteny -- Portions of chromosomes in which gene order is conserved. systemat...2506 days ago
PerlOneLiner for Bioinformatician
...ine that matches a regular expressionperl -ne 'if ($p) { print; $p = 0 } $p++ if /regex/' # Print lines that match regex AAA and regex BBB in any orderperl -ne '/AAA/ && /BB...2346 days ago
2335 days ago
Awk for Bioinformatician and computational biologist
...ine at a time.For each line, it matches with given pattern in the given order, if matches performs the corr...s many blocks as you want and they will be executed on each line in the order they appear, for example, if...2324 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
...of factors combine to make it far rarer in multicellular eukaryotes. In order for a eukaryotic species to g...and in more complex organisms it must enter the sequestered germline in order to be transmitted to offsprin...894 days ago
Installing Bio::SCF perl module
...ude/zlib.h /usr/local/include/zconf.h 2. Now make io_lib-1.9 In order to install this perl extensio...g zlib.h presence... yeschecking for zlib.h... yeschecking whether byte ordering is bigendian... nochecking...2262 days ago
Tools for Protein-Protein Docking !
...proper treatment of flexibility in protein–protein docking is still an active field of research. You first should analyzed your proteins in order to define their conformationa...2246 days ago
Understanding BLASTn output format 6 !
...blastnames Subject Blast Name(s), separated by a ';' (in alphabetical order)sskingdoms Subject Super Kingdom(s), separated by a ';' (in alphabetical order) stitle Subject Titlesal...2183 days ago