Results for "function"
Top-level pages
Comprehensive list of visualization tools for biological pathways
...understand the different processes inside a cell: proteins exert their function not in isolation but in a tig...te in the cell. Pathways come in different flavors, depending on their functions in the cell – the thre...2339 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...omic data with allele and genotype frequency, functional impact predictions, evoluti...rface; estimates variance by all SNPs; 5 main functions: “data management, est...n amino acid substitution will affect protein function; Based on degree of conservat...2961 days ago
Source Code and Pseudo Code !!
...ur pseudocode. But do cite variables that are initialized as part of their declarations. E.g. "initialize count to zero" is a good entry.Function Calls, Function Documentation, and Pseudocode...2711 days ago
- ...to use. For this, we can use the function read.xls from the&n...Alternatively, we can use the function loadWorkbook from t...ormat, it can be opened with the function read.mtp from the&n...data into the workspace with the function read.table. > ...
2541 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
...iche of the donor and the host. Over the longer term, foreign DNA may become “domesticated” in the recipient genome and provide novel function. Following are the popular t...902 days ago
Installing Bio::SCF perl module
...else rm -f ".deps/hash_table.Tpo"; exit 1; fi../utils/hash_table.c: In function ‘HashFileOpen’:.....e.o ../read/libread.a -lz -lm ../read/libread.a(open_trace_file.o): In function `find_file_url':open_trace_fi...2270 days ago
Tools to Predict the Impact of Missense Variants !
...cts possible impact of an amino acid substitution on the structure and function of a human protein using stra...equence alterations” MutationAssessor (MASS)“Predicts the functional impact of amino acid substi...2255 days ago
Protein-Protein Interaction Sites Predictions !
...on of optimal surface patches with the lowest docking desolvation energy values PINUP Protein binding site prediction with an empirical scoring function Other Sites (DNA, RNA, Metal...2254 days ago
Tools for Protein-Protein Docking !
...n energy termsMD simulated annealing refinement . Filtering based on external data. ICM Global rigid search: Monte CarloEmpirical scoring function Clustering and selection of...2254 days ago
Gap filling or Contigs extensions tools !
....uk/resources/software/pagit/ In particular, take a look at the IMAGE tool: http://genomebiology.com/2010/11/4/R41 Also SOAPdenovo has ha function for scaffolding. Not sure abo...2217 days ago
