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480 days ago
Tools for Geospatial data analysis !
...ypes of geospatial data. For example, the H3 library is designed specifically for working with hexagonal grids, while PySAL is focused on spatial econometrics and spatial analysis....467 days ago
Bioinformatics tools for genome assembly !
...ll and multi-cell bacterial genomes, as well as small eukaryot...d sequencing data. SOAPdenovo: A de Bruijn graph-based as...uch as those from PacBio or Nanopore. Minia: An assembler...the sequencing data and the genome being assembled. When selec...343 days ago
Steps to find all the repeats in the genome !
To find repeats in a genome from 2 to 9 length using a Perl script,...epeatMasker website[0]. Prepare the genome sequence: Make sure you have the genome sequence in a FASTA file fo...ic needs and the characteristics of your genome....305 days ago
Mitochondrial genome assembly tools !
Mitochondrial genome assembly tools are speciali...ng (NGS). The mitochondrial genome is relatively small compare...e to assemble mitochondrial genomes and annotate mitochondrial...hat provides a pipeline for annotating mitochondrial genomes....des: SPAdes (St. Petersburg genome assembler) is a versatile g...299 days ago