Comment on "Learn Genetics Online"
This is one of the best interative genomics tutorial that I found useful. Have a look https://lab.concord.org/embeddable.html#interactives/sam/DNA-to-proteins/1-dna-to-protein.json1620 days ago
Comment on "The Raku Programming Language"
Install Raku wget https://rakudo.perl6.org/downloads/star/rakudo-star-2019.03.tar.gz tar xfz rakudo-star-2019.03.tar.gz cd rakudo-star-2019.03 perl Configure.pl --gen-moar --make-install --prefix ~/rakudo say 'Hello World'; # Hello World1620 days ago
Comment on "Perl6 script to count ATGC !"
Yes, indeed intersting but complex script script in Perl v6 More at https://examples.p6c.dev/categories/rosalind.html1621 days ago
Comment on "EFS: an ensemble feature selection tool implemented as R-package and web-application"
A review of ensembles for feature selection is described. Current state-of-the-art is provided. Types of ensembles, combination methods and evaluat...trends are provided. all at https://www.sciencedirect.com/science/articl...1621 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
...hnologies to generate variant calls and regions for use in be...re available for GRCh37 and GRCh38 under each genome at ...ntly available for HG002 on GRCh37 and GRCh38 Benchmar...indel and structural variant calls, as well as calls in diff...1621 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
GitHub https://github.com/genome-in-a-bottle1621 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
Some useful links for GIAB ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/ https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA200694&o=acc_s%3Aa https://jimb.stanford.edu/giab-resources1622 days ago
Comment on "Perl script to count number of Ns in a multifasta file !"
If you want to count all 'N' in miltifasta file. (base) ? output_2_test git:(master) ? more scaffolds.fasta | grep -Ho N * | uniq -c 12 draft...1625 days ago
Comment on "RGFA: powerful and convenient handling of assembly graphs"
The Graphical Fragment Assembly (GFA) is a proposed format which allow to describe the product of sequence assembly. This gem implements the proposed specifications for the GFA format described under https://github.com/GFA-spec/GFA-spec/blob/master/GFA-spec.md as close as possible.1629 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Bioinformcs software are published by Genome Biology - Software section https://genomebiology.biomedcentral.com/submission-guidelines/preparing-your-manuscript/software1629 days ago