Results for "BLAST databases"
Top-level pages
Converting BLAST output into CSV
Suppose we wanted to do something with all this BLAST output. Generally, that’s the...eve all matches, or do a reciprocal BLAST, or something. As with most...ude this tutorial by converting the BLAST output in out.txt into a spre...’re looking to run the script blast/bla...2365 days ago
Tools for bacterial whole genome annotation
...ipeline depends on several internal databases and is not currently avai...p://www.cbrc.kaust.edu.sa/BEACON/. BlastKOLA: Assigns K numbers to the user's sequence data by BLAST searches, respectively, against a...their genomes and to create genome databases. It identifies repeats, align...2359 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of...t to provide the same interface to huge relational databases and flat files alike through...cumbersome, and accessing shared resources such as databases was often tricky. Modern Per...2349 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as...discovery and TE detection: BLASTER suite http://urgi.versailles.inra.fr/development/blaster/ Censor http://...mak06.html MaskerAid http://blast.wustl.edu/maskeraid/ mer-en...m.vt.edu/dl_software.htm WU-BLAST htt...2301 days ago
Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads | Bioinformatics | Oxford...//www.nature.com/articles/nrc2591 bioinformatics - BLAST DNA Sequences Reversed - Biol...https://biology.stackexchange.com/questions/8160/blast-dna...2269 days ago
Understanding BLASTn output format 6 !
BLASTn output format 6 BLASTn maps DNA against DNA, for example gene sequences against a reference genomeblastn -query genes.ffn -subject genome.fna -outfmt 6 BLASTn tabular output format 6 Col...y framesframe Subject framebtop Blast tra...2166 days ago
- It's been a while since I last installed BLAT and when I went to the download directory at UCSC: http://users.soe.ucsc.edu/~kent/src/ I found that the latest blast is...
2090 days ago
- « Previous
- 1
- 2
- 3
- Next »
